Helsinki

Manuel Cáceres defends his PhD thesis on Parameterized and Safe & Complete Graph Algorithms for Bioinformatics

On Tuesday the 3rd of October 2023, M.Sc. Manuel Cáceres defends his PhD thesis on Parameterized and Safe & Complete Graph Algorithms for Bioinformatics. The thesis is related to research done in the ...
Helsinki

Nicola Rizzo defends his PhD thesis on Indexable Sequence Graphs: Exploiting Uniqueness in the Pangenome Era

On the 27th of June 2025, M.Sc. Nicola Rizzo defends his PhD thesis on Indexable Sequence Graphs: Exploiting Uniqueness in the Pangenome Era. The thesis is related to research done in the Department ...
Indiatimes

Instant scholar - Falcon: A graph manipulation language for distributed heterogeneous systemsPhD thesis by Unnikrishnan Cheramangalath

A new framework called Falcon, developed by Unnikrishnan Cheramangalath, is revolutionizing graph analytics. This domain-specific language simplifies complex computations across diverse computing ...
Nature

TACO produces robust multisample transcriptome assemblies from RNA-seq

Accurate transcript structure and abundance inference from RNA sequencing (RNA-seq) data is foundational for molecular discovery. Here we present TACO, a computational method to reconstruct a ...